In order to use extended features in Smart Checklist - you need to set up additional custom fields.

Please see the comparison of Custom Field vs Issue Properties

Features that require Checklists custom field:

• Track checklist changes
• Search and JQL support
• Clone checklists by cloning Jira Issue
• Update Checklist by workflow state transition

Read How to set-up "Checklists" custom field 

Features that require Smart Checklist Progress custom field:

• Validate before transition
• Show Checklist progress on Agile Board

Read How to set-up "Smart Checklist Progress" custom field